CDS

Accession Number TCMCG009C26586
gbkey CDS
Protein Id XP_030507709.1
Location join(1468589..1468657,1468735..1468857,1468943..1469100,1469179..1469223,1469329..1469481,1469703..1469809,1470559..1470744,1470862..1471104,1471190..1471403,1471497..1471571,1471657..1471961,1472413..1472605,1472691..1472803,1472806..1472942,1473030..1473369,1473662..1473842,1473925..1474025,1474028..1474064,1474153..1474414,1474608..1475066,1475452..1475909,1476114..1476250,1476330..1476511,1476621..1477013,1477105..1477230,1477497..1477562,1477642..1479440,1479519..1479798,1480388..1480424,1480427..1480623,1481161..1481670,1481750..1481882,1482050..1482303)
Gene LOC115722603
GeneID 115722603
Organism Cannabis sativa

Protein

Length 2693aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA560384
db_source XM_030651849.1
Definition LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 20-like [Cannabis sativa]

EGGNOG-MAPPER Annotation

COG_category V
Description Small subunit processome component 20 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCGACTCCCTCTCATTCTATGGCTGTCAAGTCTCTCAATAACTCCGTTGGCCGTCGCCGCTTCGTCTTCAAGACTTTTTCTCAGAGAATCGAAGACATCGACATTGATGTGTATCGATGTCTTGATATAATTAAATCTGAGCCATCTGAAGGCTCTTCATTTTTTCGTGACTGTCTGGTTGAATGGAGGGAACTGAATACTGCTGAAGATTTCATCTCTTTCTATGAGGAGATTGTGCCATTTGTGCAAACACTACCTCTAGTGTTATTACACAAAGAAACTATTATGTTAAAGCTTTTATCAGTTTTACATATAAAAGCCAGACTTTCGGTTGAACCTATTCTCAGGCTAATTGCTGCTTTATCTAGGGATCTTCTAGAGGAGTTTTTGCCTTTTTTGCCAAATATTGCTGAGTCCCTATATGCTCTCCTTGAAAGCGGTGCAGATACAGAGCCAGAAATTATTGAGCAGATTTTTACATCCTGGTCATATATTATGATGTATTTACAGAAATATCTCATAAACAACCTTGACCTGGTACTCAAGGTTACCCGGAAATTGAGGTTCTATCCAAAAGATTTTGTCCAAGACTTTATGGCAGAAGCAATATCCTTCTTGTTCAGGAATGCACCTTTTGATCAGCTTAAACTAGGTGTTTGGAAGGTCATACATGAAGTTGCAAAGAAGCCTGATATAGCTACCCGGAAATATGGAGTCAGTGCTTTACTTTGCTATGTTATGAAAGGAACCTCATCGAAACTCCATTCTAAAGCAGAAAGAGTATTGAGGTTATTGATGAGCAATCCAGTACTCTGTCTTTGTGATAAATACACCGAAGGTTCAGATATTTTTGGTCAAGGCAAAAAGGAAAAGAAAGTTCCGAATACTGTTGTTGAAGTTTTAATTCTCTCATTACAAAGATTGTGTGAAATAATTGAGCCCAAAGAATTGAATATAATGTGGAAATGCTTACACATGGAAATAGCTGATTCTGTTAAGAATAAGTCTCTTACTCGATTAAGTCACTTGTTATCGCTGCTAGTCTCTACAGTTCAAATAAATGACGGAAGAAGTGTTTCTAATCACCAACCTATGATTGATGCCGTTGCACTTCTTTTACAAGAACTGATCTTACATACTGGAATCACTACTGAGGATAGTGTACCTGAAATTTTCGATCAGGTTCTTGAGTTGATGCTTTGTACTCTTGATGTGCTGCACAACTATGATGACATGTCAATTGTATCCGACTGTTCATTGCAATGGGCACCGGTGTTTGAGTTAAAGAGCGCCAGTTTGCTGGCATTTATTCACAAACTACTATTGAAGGATCATTCCATATTGAATTTCTTCAAGGTTAATATTCTGAGTGCGCTGAATGATTTAATAGAAACCTCACCAAAGGAAGTAGTATGTCTATTGCTCTCTTTATTTGAGAGACAAAGCTTAGATGAAACTTCTAAAGGAGGGCTTTTGAAGATTCAAGATTTTCTCCGGACAGAAATACAGGATGTTGTATCTCATGGTTCATCATCTACTCGACTTCAGGAAAACAACTTAGATTTGTTGTGGGGTACTGTCAATTGTTTTCCGTACTTGTTAGATCCCGAAAAAGATTCATCGGTGCTAGCTGATTTCATTGATGCACTTGATCAATGTGTAGTCATTGAATCTGACAACGCTGCTGGTGTTCCTAAACATGTTTTGCAAAGCATTATCGGCTCTGCTATTCATTCCTATTCAAAGTTGCACCGTGGTAGGAATGACAAATGTGAGGAAACAAGCAGATTTTTGCATCTTGCGAGAAGGCACAAATCGTGCACTCAAATATTATCTGCTGTTGCAGATTTTTTGGATTCTGCATATGGGTCAATAATAGAAGAAAACTGCAACTCTCGTACATATCATCCAGAACTTAAAGCAGACAAGGCTGTTGATGCAATACGTCTATTTGCTGAAAATTTGCATCACGCGGAAAAGGACCGTGTTGCAGCTCTTAGATTACTCTGCCACTATGAACTTTTGATTTGTGATGTTTCAGCAGAGGATCAGCCAGCTCATAAGAAACTGAAAACTGAATCTTCAGAGAATTCCCATACAGACAGCCAGAGCTTTAATCTTCTGCAGCTCCTTCTCTTAATTGAGACAACTCCTCTTTCAGTCTCTACATTCAGGACAGTGACCTTGTACATCTCTAAAGTACATATGGCTCTCTCTGCAAGAAGGATATCTGAAGTTTATATTCCTCTTCTTGTAAATGGAATGATTGGTGTCTTTCATAACCGGTTTAGTTATGTTTGGAATCCAGCGTCTGAATGCCTTGCGGTGGCATTAAGCAATTATGTTGGGCTAGTATGGGAAGGGTTCCTTGGTTATTTTAAGCAGATTCTCTCCACATTCCAGGCATCAAATGATCATCTTGATAAAGCAAAGGCAGAATTTTCCAGCAATGCAAGTGTTCTTGCTGAGCGCTTTAAGTTGTTTGTCGCTCCTCCTTCTGATGGTACACCATTGGCAACAGTAATAACCTTGTTGCTCCAATCTTTACAAAGAATTCCAACACTTGTTGATTCTCGTTCACGAGATGTTGTTCCTTTGCTTTTGAAGTTTTTGGGCTATGATAGCAGTGAGCATATAAGTGTGGGATCATTCAGTTCACTTGTTTGTAAAGGCAAAGATTGGAAGGTTATTCTAAAAGAATGGTTAAATTTGCTGAAATTGATGCGGAACCTTAAGTCCTTATCGAATCAATTCCTTAAAGATGTGCTCGAAAATAGGCTTTTGGATGCAAATGATCCTGAGATACAGGCAGCGGTTCTTGAATGCCTGTTGATTTGGAAAGATGATTTTCTGCTATCATATGATCAACACCTGAAAAATATACTTAGCTTTAATAGTTTCAGAGAGGAGCTAACCACATGGAGTTTATCCAGAGAATCTAAACATATTGAAGAGTACCACAGACCTTACCTTGTACCTATAGTGATCCGTCTTCTGATGCCAAAAGTCAGGAAGTTGAAGAAGAATGCCTCACGAAAGCATGCAAGTGTAAATTATCGAAAGGCGGTTCTTGGTTTCTTAGCGCAACTTGATGTTGATGAGCTTCCCCTTTTCTATGGATTGTTAATGAAGCCTTTGCAAATTGGGACAGTGGGAAGTGATGATACATCTGACTGGTTTTGGACTTCTTCCGGAAGCTCTAAAGATAGGTTTCAAGCTTCAAATTTTCTTAAGTATTTCACAGTTGATAATATTACAGCATTGTCATGGAAGAAAAGAAATGGTTTTCTTCATGTGATTGAAGATGTTGTTGGAGTTTTCGATGAGTTGCGAATCAAGCCTTTTCTTGATTTTTTGATGGGATGTGTTGTTCGGATATTGGAGAGCTGCACATGTAGTCTTGATGCTGCAAAGGGATATAGATCTTTGGATGAAAATCAAAACAGTTCAAATCCGTCTTTGCTTCAGAAAGAAAATACTGAAGGAAATACTGTCTCGGCCATTTCCGCTGTGAAGCAATTCAAGGATTTAAGGTCCTCATGCTTGAAAATTGTTTCTCTTGTTCTCAACAAGTACGAAGATCATGATTTTGGTTATGATTTCTGGGACCTCTTCTTTAAGTCAGTGAAGCCTTTGGTTGAAAGTTTCAAGCAGGAAGGTTCTAGCGGTGAAAAGCCTAGTTCACTCTTCTCTTGCTTTGTTGCGATGACTAGAAGTCAGAAACTTGTGCCCCTGCTTTGTCGGGAGAAGAGTCTTGTTCCTGACATATTCTCAATTCTAACTGTTACATCAGCATCTGAAGCTATTGTAAGATGTGTTCTAAAGTTCATTGAGAACCTATTGTATCTTGATAGTGAGTTGGATGGTGATGATGTAAAGATAGTTCTACTTCCCAATCTTGATGCACTTATTTGTAGCTTGCATGTGTTTTTCCAAAGCGAATGTGCAACCAAGAGGAAATTGATCAAAGACCCTGGGGAGGGTGAGATTAGAATTTTCAAGTTTCTTTCTAAGTATGTAAAGGATCCAATTTCTGCCAGGAAGTTCATCGACATTTTGCTCCCATTTTTGTCAAAGGGAGTTCAAAGTTCTGATGTCTGTCGTGAATCTGTACAAGTCATACAGGGGATTATACCAATACTAGGAAGTGAAATTACAACAACAATCCTGAATGGTATTTCTCCGTTGTTTGTTTCTGGTGATCGAGATTTGCGCACATCTCTCTGTGATCTTCTTGAAACTCTTGCCCAAGTTGATCCCTCCGTAACTGTTGTGGCAAAACTTGTGTGTGACTTGAATGCAACCTCTACTGTGGAAATTGGAGCCCTTGATTATGACATTATAATCAACTCTTATGAAAAGATCAGTGCAAATAGTGCAAACTTCTTCTATACTGTTCCGGAGGATCAAGCATTACTGATTTTGTCTCATTGTGTATACGATATGTCATCTACAGAGTTAATTTTAAGGCATAGTTCCTATGGATTGTTACTCTCGTTTCTCGAATTTGCTGGTGAAGTTCTCAGTCATGTAGAAAATGATCTAGACACGCCTCCCCCGAAGAAAATTGGTGATCATTGGACAGTAGGATCCATTAAGCGCATAATAAACAAGTTTCTCTTGAAGCATCTCGGGCATGCAATGAAGGGAGATGCTTCTTTGAAAAAGGAATGGATTAATTTACTACGAGAAATGGTGATGAAACTTCCCAATATGGGCAACCTGGATTCGTTAAAGGTTCTCTGTGATGAAGACGTTGAAATAGATTTTTTCAACAATATCATTCATTTACAGAGGCACAGAAGAGCAAGAGCTTTGGCACGCTTCAGGAACGCTATCGGTTCTAACTCTATGCCAGAGGGAATAATAAATAAAGTTTTTGTACCCCTCTTTTTTAGTATGCTTTTTGAAGTTCAAGAAGGAAAGGGTGAACATGTTAGAGATGCATGCATAGATGCCCTTGCTTCGGTTTCTGGCCAAATGAAGTGGGATTCTTATTATTCTCTGTTATTGAGATGCTTCAATGAGATAAACTTGCATCCCGATAAGCAGAAGAGTTTAGTACGGCTAATTTGCTTTATTTTAGACCAGTTCCATTTTTCAGCCACTGCATCCTCTTGTGACAATCCTTCTGATTCCGGGACCGTTGAGTCAAGTTCTTTGATTACACTTAGTAAGTGTAGTGGCTCTTCTGTGCTGTCTGAGATACAAATTTGTCTTCAGAAAACTGTGCTGCCAAAGATACAGAAGTTACTGGAATCCGATTCTGATAGGGTTAATGTTAACGTCAACCTCGCTGCACTTAAGATATTAAAGTTGCTTCCTGGAGACATAATGGACTCAGAGCTCCTACTATTGTGCATCAGCGTATCAAACTTTCTGAAGAATCGTTTAGAAAGCATCCGTGATGAAGCTAGGTCTGCTTTGGCTGCATGTTTGAAGGAGCTCGGGTTAGAATACTTGCAGTTTCTAGTCAAGGTTCTTCGGACCACATTAAAGCGAGGATATGAAATGCATGTGTTGGGGTACACCTTAAATTTCATTTTATCGAAGTTTCTTTCGGTTCCTGTTTGTGGCAAGCTGGATTATTGTTTGGAAGATCTCCTATCGATAGTTGAGAATGATATTCTTGGAGAAGTTGCCGAGGAAAAAGATGTGGATAAGATTGCTTCAAAAATGAAAGAAACTAGGAAGAGGAAGTCTTTTGAAACACTACAATTAATTGCTCAGAGCATTACATTCAAAACCCATGCTTTGAAAGTATTGTCACCTGTTGCATCTCACTTGCAAAACCGAATGACTCCCAAAATCAAAGCGAAATTGGAAAGCATGTTGAATCACATAGCTGCTGGTATTGGATCCAACCCTTCTGTAGATCAGACTGACTTGTTTATTTTTCTATTTGGCCTCATTGAAGATGGGATTAAAAATAAGGATGAGAACTCAACAATTTCAAACACTCCTAAAAATCGTAAAAAGGGTGCAGGTGGAAAAAATGTTCCCTCTGTCCGAGTTAAACATGTAAAGTCATTAGGTTCACATCTTATAATTGTTTTCGCTCTCGGGATACTGCATAAAAGTGTGAAGAGCTTAAAGAATGCCAAAAATGATGTAAAAGTATTAGCAATGCTTGATCCTTTTATCCCGTTGCTTGGAAACTGCTTGAATTCCAAATACGAAGATGTTTTGTCTGCAACTCTTAGGTGCCTTACTCCACTTGTAAGATTGCCTTTACCATCCATCGAATCCCAAGTTGATACGATAAAAGGTTCCCTGTTTGATATAGCCCAAAGTACTATAAATGTCGACAGTTCTTTAATGCAGTCTTGCCTACGATTGTTGACTGTTATATTGGGAGGAACTAATACCACACTTTCATCAGAAGAGCTACATTTGCTAATTCAGCTTCCACTTTTTGTTGAGCTAGAAAGAAATCCCTCTTTTGTTGCACTTTCACTTTTAAAGGCAATTGTTAGCCGTAAGCTAGTTGTTCCGGAAATATATGATCTTGTAACTCGAGTTGCGGAATTGATGGTTACCAGTCAAGTAGAACCGATACGTCAAAAATGCAGTCAGATTCTGTTGCAGTTCTTACTTGATTATCGTCTTTCAGGGAAACGTCTGCAACAACATTTGGATTCTCTGCTTTCTAATCTTAGGTATGAACACCCAAGTGGAAGAAAAGCTGCACTCGAAATGCTTCATGCAATTATTGTTAAGTTTCCGAAAAGTGTTGTGGATGATCAATCACAAACACTATTTATCCATTTGGTGGCTTGCTTAGCTAATGATCTAGATAGTGAGGTTCGCGCTATGAGTGGTGCAGCTATTAAGCGTCTCATCGGTTGTGTAAGTGCACATTCACTTCATTCTATTCTTGAGAGCAGTCTGTCTTGGTATATGGATGAGAAGCCAAAACTGTGGAGTGCTGCAGCACAGGTCTTGGGATTATTAGTTGAAGGGCAAAAGAAAGGATGAAAACACATCAGAAGTAGTGTCTTGCCAAGAGCTAGAACTATTTTGAAATCTGCCATCGATGACTATAATGACAGATCACAAGATTATTCTGATGAGGCTACTATCCCATTCTGGAAGGAGGCATACTATTCATTGATAATGTTAGAGAAAATTCTGCATGAGTTTCATGATTTATGCTTTGAAGAGGATCTTGAGGATGTATGGGATGCAATATGTGAACTTCTCTTGCACCCTCACACGTGGTTACGAGACATTTCGAGTCGCCTAGTAGCATTTTACTTCTCTGCCGTGACAGAACTATGCAAGAAGAATCGTGAACTTTCCCTTCAAAGTTATTTCCTTACGAGGCCAAGTAGACTATTTATGATTGCCGTTTCCACTTGTTGCCAACTGAAGACAAAAGTCAGTGATGATGCCGCTAGCAACCTGATTGTACAAAATATCGTTTTTACTGTTTGTGGTGTGCACTCTTTGATGGGACAACCGGAGCACGAACAACCTCAAAGATTTTGGTCTACCCTCGAGCAGCACGAGCAAGGTCATTTTCTTAAAGCATTAAAGTTGATTGATTCGGGGAAAGTGCAAACCTCGTTTCTGTCTCTTACTCTTGAAGACAATGGACATTCTAAGGCCCTCAGGAACTTACTTATCTCCACTATGCTAAAAAAGATGGGAAAAATCGCCCTTCAAATGGAATCTATTCAGATGAAAATTGTCTTCAATAGTTATGGCAAGATTTTTTCTCAATTTTCCGATGAAGACCGCCAACTTTATGCATATGAAATTCTCCTACCCTTGTATAAAGTTTGCGAAGGGTTCGCTGGAAGACTCGTATCTGATGATATGAAGCAACTAGCACAAGAAGTATGCGACCGTGTTAGACAAATGTTGGGCGTCCAAACGTTTGTGCAAGTCTACAGCGAGATCAGGAAAATGCTGAAGACAAAACGAGACAAGAGAAAACAAGAAGAGAAAATCATGGCTGTAGTTAATCCAATGCGAAACGCAAAGAGGAAATTGAGGATCGCTGCTAAACATCGTGCCCACAAGAAAAAGAAAATAATGACAATGAAATACGGGCGATGGGTGTAG
Protein:  
MATPSHSMAVKSLNNSVGRRRFVFKTFSQRIEDIDIDVYRCLDIIKSEPSEGSSFFRDCLVEWRELNTAEDFISFYEEIVPFVQTLPLVLLHKETIMLKLLSVLHIKARLSVEPILRLIAALSRDLLEEFLPFLPNIAESLYALLESGADTEPEIIEQIFTSWSYIMMYLQKYLINNLDLVLKVTRKLRFYPKDFVQDFMAEAISFLFRNAPFDQLKLGVWKVIHEVAKKPDIATRKYGVSALLCYVMKGTSSKLHSKAERVLRLLMSNPVLCLCDKYTEGSDIFGQGKKEKKVPNTVVEVLILSLQRLCEIIEPKELNIMWKCLHMEIADSVKNKSLTRLSHLLSLLVSTVQINDGRSVSNHQPMIDAVALLLQELILHTGITTEDSVPEIFDQVLELMLCTLDVLHNYDDMSIVSDCSLQWAPVFELKSASLLAFIHKLLLKDHSILNFFKVNILSALNDLIETSPKEVVCLLLSLFERQSLDETSKGGLLKIQDFLRTEIQDVVSHGSSSTRLQENNLDLLWGTVNCFPYLLDPEKDSSVLADFIDALDQCVVIESDNAAGVPKHVLQSIIGSAIHSYSKLHRGRNDKCEETSRFLHLARRHKSCTQILSAVADFLDSAYGSIIEENCNSRTYHPELKADKAVDAIRLFAENLHHAEKGXRVAALRLLCHYELLICDVSAEDQPAHKKLKTESSENSHTDSQSFNLLQLLLLIETTPLSVSTFRTVTLYISKVHMALSARRISEVYIPLLVNGMIGVFHNRFSYVWNPASECLAVALSNYVGLVWEGFLGYFKQILSTFQASNDHLDKAKAEFSSNASVLAERFKLFVAPPSDGTPLATVITLLLQSLQRIPTLVDSRSRDVVPLLLKFLGYDSSEHISVGSFSSLVCKGKDWKVILKEWLNLLKLMRNLKSFXSNQFLKDVLENRLLDANDPEIQAAVLECLLIWKDDFLLSYDQHLKNILSFNSFREELTTWSLSRESKHIEEYHRPYLVPIVIRLLMPKVRKLKKNASRKHASVNYRKAVLGFLAQLDVDELPLFYGLLMKPLQIGTVGSDDTSDWFWTSSGSSKDRFQASNFLKYFTVDNITALSWKKRNGFLHVIEDVVGVFDELRIKPFLDFLMGCVVRILESCTCSLDAAKGYRSLDENQNSSNPSLLQKENTEGNTVSAISAVKQFKDLRSSCLKIVSLVLNKYEDHDFGYDFWDLFFKSVKPLVESFKQEGSSGEKPSSLFSCFVAMTRSQKLVPLLCREKSLVPDIFSILTVTSASEAIVRCVLKFIENLLYLDSELDGDDVKIVLLPNLDALICSLHVFFQSECATKRKLIKDPGEGEIRIFKFLSKYVKDPISARKFIDILLPFLSKGVQSSDVCRESVQVIQGIIPILGSEITTTILNGISPLFVSGDRDLRTSLCDLLETLAQVDPSVTVVAKLVCDLNATSTVEIGALDYDIIINSYEKISANSANFFYTVPEDQALLILSHCVYDMSSTELILRHSSYGLLLSFLEFAGEVLSHVENDLDTPPPKKIGDHWTVGSIKRIINKFLLKHLGHAMKGDASLKKEWINLLREMVMKLPNMGNLDSLKVLCDEDVEIDFFNNIIHLQRHRRARALARFRNAIGSNSMPEGIINKVFVPLFFSMLFEVQEGKGEHVRDACIDALASVSGQMKWDSYYSLLLRCFNEINLHPDKQKSLVRLICFILDQFHFSATASSCDNPSDSGTVESSSLITLSKCSGSSVLSEIQICLQKTVLPKIQKLLESDSDRVNVNVNLAALKILKLLPGDIMDSELLLLCISVSNFLKNRLESIRDEARSALAACLKELGLEYLQFLVKVLRTTLKRGYEMHVLGYTLNFILSKFLSVPVCGKLDYCLEDLLSIVENDILGEVAEEKDVDKIASKMKETRKRKSFETLQLIAQSITFKTHALKVLSPVASHLQNRMTPKIKAKLESMLNHIAAGIGSNPSVDQTDLFIFLFGLIEDGIKNKDENSTISNTPKNRKKGAGGKNVPSVRVKHVKSLGSHLIIVFALGILHKSVKSLKNAKNDVKVLAMLDPFIPLLGNCLNSKYEDVLSATLRCLTPLVRLPLPSIESQVDTIKGSLFDIAQSTINVDSSLMQSCLRLLTVILGGTNTTLSSEELHLLIQLPLFVELERNPSFVALSLLKAIVSRKLVVPEIYDLVTRVAELMVTSQVEPIRQKCSQILLQFLLDYRLSGKRLQQHLDSLLSNLRYEHPSGRKAALEMLHAIIVKFPKSVVDDQSQTLFIHLVACLANDLDSEVRAMSGAAIKRLIGCVSAHSLHSILESSLSWYMDEKPKLWSAAAQVLGLLVEGQKKGFXKHIRSSVLPRARTILKSAIDDYNDRSQDYSDEATIPFWKEAYYSLIMLEKILHEFHDLCFEEDLEDVWDAICELLLHPHTWLRDISSRLVAFYFSAVTELCKKNRELSLQSYFLTRPSRLFMIAVSTCCQLKTKVSDDAASNLIVQNIVFTVCGVHSLMGQPEHEQPQRFWSTLEQHEQGHFLKALKLIDSGKVQTSFLSLTLEDNGHSKALRNLLISTMLKKMGKIALQMESIQMKIVFNSYGKIFSQFSDEDRQLYAYEILLPLYKVCEGFAGRLVSDDMKQLAQEVCDRVRQMLGVQTFVQVYSEIRKMLKTKRDKRKQEEKIMAVVNPMRNAKRKLRIAAKHRAHKKKKIMTMKYGRWV